pancreatic_endocrinogenesis#

scdiffeq.datasets._pancreatic_endocrinogenesis.pancreatic_endocrinogenesis(data_dir: str = '/home/runner/work/scDiffEq/scDiffEq/docs/source', filter_genes: bool = True, reduce_dimensions: bool = True, force_download: bool = False, download_unprocessed: bool = False) → AnnData[source]#

Pancreas dataset

Parameters:

  • data_dir – str, default=os.getcwd() Path to the directory where the data will be saved.

  • filter_genes – bool, default=True Whether to filter genes.

  • reduce_dimensions – bool, default=True Whether to reduce dimensions.

  • force_download – bool, default=False Whether to force download the data.

  • download_unprocessed – bool, default=False Whether to download the unprocessed data.

Returns:

Preprocessed AnnData object.

Return type:

AnnData