API Reference# Here you will find documentation of the scDiffEq API. This covers both the model as well as the supporting function modules. Model# Go Model (sdq.scDiffEq) modules sdq.scDiffEq sdq.core.lightning_models sdq.core Data I/O# Go Data I/O (sdq.io) modules sdq.io.read_h5ad sdq.io.read_pickle sdq.io.write_pickle sdq.io.Project sdq.io.Version sdq.io.Checkpoint sdq.io.HParams Datasets# Go Datasets (sdq.datasets) modules sdq.datasets.pancreas sdq.datasets.human_hematopoiesis Plotting# Go Plotting (sdq.pl) modules sdq.pl.velocity_stream sdq.pl.temporal_expression sdq.pl.simulation_umap sdq.pl.simulation_trajectory_gif sdq.pl.simulation_expression_gif Tools# Go Tools (sdq.tl) modules sdq.tl.annotate_cell_state sdq.tl.annotate_cell_fate sdq.tl.kNN sdq.tl.simulate sdq.tl.perturb
